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  1. hlaloh-pipeline hlaloh-pipeline Public

    hla-typing by optitype & polysolver , detect loh by lohhla.

    R 5 1

  2. lancet lancet Public

    Forked from nygenome/lancet

    Microassembly based somatic variant caller for NGS data

    C

  3. MSI_analyse MSI_analyse Public

    A improvement on MSI status calculataion

    Jupyter Notebook

  4. VarScan2 VarScan2 Public

    Fix some bugs for low min-variant-freq & some MS site reported as Somatic-indel issue.

    Java