Suggestions for pandas-stubs and lxml-stubs

[hauntsaninja]

Resolves #14328

Remove the sqlalchemy comment because it's now a PEP 561 package

[github-actions]

Diff from mypy_primer, showing the effect of this PR on open source code:

bokeh (https://github.com/bokeh/bokeh)
- src/bokeh/sampledata/antibiotics.py:42:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/antibiotics.py:42:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/anscombe.py:41:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/anscombe.py:41:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/util/sampledata.py:36:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/util/sampledata.py:36:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/us_marriages_divorces.py:38:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/us_marriages_divorces.py:38:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/sea_surface_temperature.py:40:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/sea_surface_temperature.py:40:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/population.py:38:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/population.py:38:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/daylight.py:40:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/daylight.py:40:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/commits.py:39:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/commits.py:39:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/browsers.py:44:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/browsers.py:44:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/autompg2.py:38:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/autompg2.py:38:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/autompg.py:46:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/autompg.py:46:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/sampledata/airports.py:42:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/sampledata/airports.py:42:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/util/serialization.py:47:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/util/serialization.py:47:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/core/serialization.py:454:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
- src/bokeh/core/property/pd.py:31:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/core/serialization.py:454:1: error: Library stubs not installed for "pandas"  [import]
+ src/bokeh/core/property/pd.py:31:1: error: Library stubs not installed for "pandas"  [import]
- src/bokeh/core/property/pd.py:32:1: error: Cannot find implementation or library stub for module named "pandas.core.groupby.groupby"  [import]
+ src/bokeh/core/property/pd.py:32:1: error: Library stubs not installed for "pandas.core.groupby.groupby"  [import]
+ src/bokeh/core/property/pd.py:32:1: note: Hint: "python3 -m pip install pandas-stubs"
+ src/bokeh/core/property/pd.py:32:1: note: (or run "mypy --install-types" to install all missing stub packages)
- src/bokeh/io/export.py:38:1: note: (or run "mypy --install-types" to install all missing stub packages)
- src/bokeh/server/tornado.py:763:1: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ src/bokeh/server/tornado.py:763:1: error: Library stubs not installed for "pandas"  [import]

arviz (https://github.com/arviz-devs/arviz)
- arviz/plots/backends/__init__.py:6: error: Skipping analyzing "pandas": module is installed, but missing library stubs or py.typed marker  [import]
+ arviz/plots/backends/__init__.py:6: error: Library stubs not installed for "pandas"  [import]
+ arviz/plots/backends/__init__.py:6: note: Hint: "python3 -m pip install pandas-stubs"
+ arviz/plots/backends/__init__.py:6: note: (or run "mypy --install-types" to install all missing stub packages)
- arviz/stats/stats_utils.py:8: error: Skipping analyzing "pandas": module is installed, but missing library stubs or py.typed marker  [import]
+ arviz/stats/stats_utils.py:8: error: Library stubs not installed for "pandas"  [import]
- arviz/stats/stats.py:10: error: Skipping analyzing "pandas": module is installed, but missing library stubs or py.typed marker  [import]
+ arviz/stats/stats.py:10: error: Library stubs not installed for "pandas"  [import]
- arviz/stats/diagnostics.py:8: error: Skipping analyzing "pandas": module is installed, but missing library stubs or py.typed marker  [import]
+ arviz/stats/diagnostics.py:8: error: Library stubs not installed for "pandas"  [import]
- arviz/tests/base_tests/test_diagnostics.py:7: error: Skipping analyzing "pandas": module is installed, but missing library stubs or py.typed marker  [import]
+ arviz/tests/base_tests/test_diagnostics.py:7: error: Library stubs not installed for "pandas"  [import]
- arviz/tests/base_tests/test_plots_matplotlib.py:10: error: Skipping analyzing "pandas": module is installed, but missing library stubs or py.typed marker  [import]
+ arviz/tests/base_tests/test_plots_matplotlib.py:10: error: Library stubs not installed for "pandas"  [import]
- arviz/tests/base_tests/test_plots_bokeh.py:7: error: Skipping analyzing "pandas": module is installed, but missing library stubs or py.typed marker  [import]
+ arviz/tests/base_tests/test_plots_bokeh.py:7: error: Library stubs not installed for "pandas"  [import]

spark (https://github.com/apache/spark)
- python/pyspark/sql/pandas/utils.py:27: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/sql/pandas/utils.py:27: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/_typing.py:22: error: Cannot find implementation or library stub for module named "pandas.api.extensions"  [import]
+ python/pyspark/pandas/_typing.py:22: error: Library stubs not installed for "pandas.api.extensions"  [import]
- python/pyspark/sql/udf.py:144: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/sql/udf.py:144: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/sql/session.py:1218: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/sql/session.py:1218: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/sql/pandas/types.py:245: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
+ python/pyspark/sql/pandas/types.py:245: error: Library stubs not installed for "pandas.api.types"  [import]
- python/pyspark/sql/pandas/types.py:345: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/sql/pandas/types.py:345: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/sql/pandas/serializers.py:204: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/sql/pandas/serializers.py:204: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/sql/pandas/serializers.py:210: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
+ python/pyspark/sql/pandas/serializers.py:210: error: Library stubs not installed for "pandas.api.types"  [import]
- python/pyspark/sql/pandas/conversion.py:92: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/sql/pandas/conversion.py:92: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/sql/pandas/conversion.py:93: error: Cannot find implementation or library stub for module named "pandas.core.dtypes.common"  [import]
+ python/pyspark/sql/pandas/conversion.py:93: error: Library stubs not installed for "pandas.core.dtypes.common"  [import]
- python/pyspark/sql/pandas/conversion.py:254: error: Cannot find implementation or library stub for module named "pandas.errors"  [import]
+ python/pyspark/sql/pandas/conversion.py:254: error: Library stubs not installed for "pandas.errors"  [import]
- python/pyspark/sql/pandas/conversion.py:570: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
+ python/pyspark/sql/pandas/conversion.py:570: error: Library stubs not installed for "pandas.api.types"  [import]
- python/pyspark/sql/pandas/_typing/__init__.pyi:34: error: Cannot find implementation or library stub for module named "pandas.core.frame"  [import]
+ python/pyspark/sql/pandas/_typing/__init__.pyi:34: error: Library stubs not installed for "pandas.core.frame"  [import]
- python/pyspark/sql/pandas/_typing/__init__.pyi:35: error: Cannot find implementation or library stub for module named "pandas.core.series"  [import]
+ python/pyspark/sql/pandas/_typing/__init__.pyi:35: error: Library stubs not installed for "pandas.core.series"  [import]
- python/pyspark/sql/connect/client.py:50: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/sql/connect/client.py:50: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/strings.py:34: error: Cannot find implementation or library stub for module named "pandas"  [import]
- python/pyspark/pandas/datetimes.py:24: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/pandas/strings.py:34: error: Library stubs not installed for "pandas"  [import]
+ python/pyspark/pandas/datetimes.py:24: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/datetimes.py:25: error: Cannot find implementation or library stub for module named "pandas.tseries.offsets"  [import]
+ python/pyspark/pandas/datetimes.py:25: error: Library stubs not installed for "pandas.tseries.offsets"  [import]
- python/pyspark/pandas/typedef/typehints.py:31: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/pandas/typedef/typehints.py:31: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/typedef/typehints.py:32: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
+ python/pyspark/pandas/typedef/typehints.py:32: error: Library stubs not installed for "pandas.api.types"  [import]
- python/pyspark/pandas/typedef/typehints.py:33: error: Cannot find implementation or library stub for module named "pandas.api.extensions"  [import]
+ python/pyspark/pandas/typedef/typehints.py:33: error: Library stubs not installed for "pandas.api.extensions"  [import]
- python/pyspark/pandas/utils.py:42: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/pandas/utils.py:42: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/utils.py:43: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
+ python/pyspark/pandas/utils.py:43: error: Library stubs not installed for "pandas.api.types"  [import]
- python/pyspark/pandas/data_type_ops/base.py:24: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/pandas/data_type_ops/base.py:24: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/data_type_ops/base.py:25: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
+ python/pyspark/pandas/data_type_ops/base.py:25: error: Library stubs not installed for "pandas.api.types"  [import]
- python/pyspark/pandas/internal.py:25: error: Cannot find implementation or library stub for module named "pandas"  [import]
- python/pyspark/pandas/internal.py:26: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
- python/pyspark/pandas/plot/core.py:20: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/pandas/internal.py:25: error: Library stubs not installed for "pandas"  [import]
+ python/pyspark/pandas/internal.py:26: error: Library stubs not installed for "pandas.api.types"  [import]
+ python/pyspark/pandas/plot/core.py:20: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/plot/core.py:25: error: Cannot find implementation or library stub for module named "pandas.core.base"  [import]
+ python/pyspark/pandas/plot/core.py:25: error: Library stubs not installed for "pandas.core.base"  [import]
- python/pyspark/pandas/plot/core.py:26: error: Cannot find implementation or library stub for module named "pandas.core.dtypes.inference"  [import]
+ python/pyspark/pandas/plot/core.py:26: error: Library stubs not installed for "pandas.core.dtypes.inference"  [import]
- python/pyspark/pandas/indexing.py:26: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/pandas/indexing.py:26: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/indexing.py:27: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
+ python/pyspark/pandas/indexing.py:27: error: Library stubs not installed for "pandas.api.types"  [import]
- python/pyspark/pandas/accessors.py:25: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/pandas/accessors.py:25: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/spark/accessors.py:1237: error: Cannot find implementation or library stub for module named "pandas"  [import]
- python/pyspark/pandas/generic.py:41: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/pandas/spark/accessors.py:1237: error: Library stubs not installed for "pandas"  [import]
+ python/pyspark/pandas/generic.py:41: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/generic.py:42: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
+ python/pyspark/pandas/generic.py:42: error: Library stubs not installed for "pandas.api.types"  [import]
- python/pyspark/pandas/frame.py:53: error: Cannot find implementation or library stub for module named "pandas"  [import]
+ python/pyspark/pandas/frame.py:53: error: Library stubs not installed for "pandas"  [import]
- python/pyspark/pandas/frame.py:54: error: Cannot find implementation or library stub for module named "pandas.api.types"  [import]
+ python/pyspark/pandas/frame.py:54: error: Library stubs not installed for "pandas.api.types"  [import]
- python/pyspark/pandas/frame.py:60: error: Cannot find implementation or library stub for module named "pandas.tseries.frequencies"  [import]
+ python/pyspark/pandas/frame.py:60: error: Library stubs not installed for "pandas.tseries.frequencies"  [import]
- python/pyspark/pandas/frame.py:63: error: Cannot find implementation or library stub for module named "pandas.io.formats.style"  [import]
+ python/pyspark/pandas/frame.py:63: error: Library stubs not installed for "pandas.io.formats.style"  [import]
- python/pyspark/pandas/frame.py:65: error: Cannot find implementation or library stub for module named "pandas.core.dtypes.common"  [import]
+ python/pyspark/pandas/frame.py:65: error: Library stubs not installed for "pandas.core.dtypes.common"  [import]

... (truncated 156 lines) ...