[BUG] ImportError: libgdal.so.26: cannot open shared object file: No such file or directory in nightly container

[drabastomek]

Describe the bug
When importing cuspatial I got this ImportError: libgdal.so.26: cannot open shared object file: No such file or directory in nightly container�.

FULL TRACE

---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)
<ipython-input-3-aa33e033382d> in <module>
      1 import cudf
----> 2 import cuspatial
      3 from collections import OrderedDict
      4 import numpy as np
      5 import datetime as dt

/opt/conda/envs/rapids/lib/python3.7/site-packages/cuspatial/__init__.py in <module>
----> 1 from .core import interpolate
      2 from .core.gis import (
      3     directed_hausdorff_distance,
      4     haversine_distance,
      5     lonlat_to_cartesian,

/opt/conda/envs/rapids/lib/python3.7/site-packages/cuspatial/core/interpolate.py in <module>
      6 from cudf import DataFrame, Series
      7 
----> 8 from cuspatial._lib.interpolate import (
      9     cubicspline_coefficients,
     10     cubicspline_interpolate,

ImportError: libgdal.so.26: cannot open shared object file: No such file or directory

Steps/Code to reproduce bug
import cuspatial should load the library.

Expected behavior
Should load the library.

Environment details (please complete the following information):

• Environment location: Docker

• Method of cuSpatial install: Docker

  • If method of install is [Docker], provide docker pull & docker run commands used

  -- PULL: docker pull rapidsai/rapidsai-nightly:cuda10.2-runtime-ubuntu18.04-py3.7
  -- RUN:

docker run --gpus all -it -p 8888:8888 -p 8787:8787 -p 8786:8786 --name kdd_rapids \
	rapidsai/rapidsai-nightly:cuda10.2-runtime-ubuntu18.04-py3.7

Additional context
Add any other context about the problem here.

[cwharris]

Hi @drabastomek, what version of gdal is currently installed in the container?

[thomcom]

Looks like it is gdal 3.1.2 @cwharris

[drabastomek]

As @thomcom suggested -- current version is GDAL 3.1.2, released 2020/07/07.

The workaround that got me unblocked involved commenting out portions of the __init__.py and also copying the libdgal.so.27 to libgdal.so.26 (I only needed the haversine_distance so that was fine).

[github-actions]

This issue has been marked rotten due to no recent activity in the past 90d. Please close this issue if no further response or action is needed. Otherwise, please respond with a comment indicating any updates or changes to the original issue and/or confirm this issue still needs to be addressed.

[github-actions]

This issue has been marked stale due to no recent activity in the past 30d. Please close this issue if no further response or action is needed. Otherwise, please respond with a comment indicating any updates or changes to the original issue and/or confirm this issue still needs to be addressed. This issue will be marked rotten if there is no activity in the next 60d.

[trxcllnt]

I think this was the same issue we filed #375 to fix?

[github-actions]

This issue has been labeled inactive-30d due to no recent activity in the past 30 days. Please close this issue if no further response or action is needed. Otherwise, please respond with a comment indicating any updates or changes to the original issue and/or confirm this issue still needs to be addressed. This issue will be labeled inactive-90d if there is no activity in the next 60 days.

[harrism]

Closing due to inactivity. Please reopen if still needed.