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Optimise broadcast_arrays in katdal import (#326) #1267

Optimise broadcast_arrays in katdal import (#326)

Optimise broadcast_arrays in katdal import (#326) #1267

Workflow file for this run

name: Ubuntu CI
on:
push:
branches:
- master
tags:
- "*"
pull_request:
schedule:
- cron: '30 2 * * 1,4' # Every Monday and Thursday @ 2h30am UTC
env:
POETRY_VERSION: 1.6.1
MINIO_SERVER_DOWNLOAD_URL: https://dl.min.io/server/minio/release/linux-amd64/archive/minio_20231111081441.0.0_amd64.deb
jobs:
check_skip:
runs-on: ubuntu-latest
if: |
!contains(format('{0} {1} {2}', github.event.head_commit.message, github.event.pull_request.title, github.event.pull_request.body), '[skip ci]')
steps:
- run: |
cat <<'MESSAGE'
github.event_name: ${{ toJson(github.event_name) }}
github.event:
${{ toJson(github.event) }}
MESSAGE
test:
needs: check_skip
runs-on: ubuntu-latest
if: "!contains(github.event.head_commit.message, '[skip ci]')"
strategy:
fail-fast: false
matrix:
python-version: ["3.9", "3.10", "3.11"]
steps:
- name: Create Cache Hash
run: |
export HASH=$(sha256sum <<EOT | cut -c -16
${{ env.POETRY_VERSION }}
${{ env.MINIO_SERVER_DOWNLOAD_URL }}
EOT
)
echo "INSTALL_CACHE_HASH=$HASH" >> $GITHUB_ENV
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Cache Installations
id: cache-installs
uses: actions/cache@v4
with:
path: ~/.local
key: install-${{ env.INSTALL_CACHE_HASH }}-2
- name: Install Poetry
if: steps.cache-installs.outputs.cache-hit != 'true'
run: |
curl -sSL https://install.python-poetry.org | python3 - --version ${{ env.POETRY_VERSION }}
- name: Test poetry run
run: poetry --version
- name: Install Minio Server
if: steps.cache-installs.outputs.cache-hit != 'true'
run: |
cd /tmp
wget -q -c ${{ env.MINIO_SERVER_DOWNLOAD_URL }} -O minio.deb
dpkg-deb --extract minio.deb /tmp/minio
mkdir -p "${HOME}/.local/bin"
echo "${HOME}/.local/bin" >> $GITHUB_PATH
install /tmp/minio/usr/local/bin/minio "${HOME}/.local/bin/minio"
- name: Test minio run
run: minio --help
- name: Checkout source
uses: actions/checkout@v4
with:
fetch-depth: 1
- name: Setup a virtual environment appropriate to the python version
run: poetry env use python${{ matrix.python-version }}
- name: Install dask-ms base
run: poetry install --extras "testing arrow zarr"
- name: Test dask-ms base
run: poetry run py.test -s -vvv daskms/
- name: Install dask-ms complete
run: poetry install --extras "testing complete"
- name: Test dask-ms complete
run: poetry run py.test -s -vvv daskms/
# - name: Debug with tmate on failure
# if: ${{ failure() }}
# uses: mxschmitt/action-tmate@v3
test_apps:
needs: check_skip
runs-on: ubuntu-latest
if: "!contains(github.event.head_commit.message, '[skip ci]')"
strategy:
fail-fast: false
matrix:
python-version: ["3.10"]
steps:
- name: Create Cache Hash
run: |
export HASH=$(sha256sum <<EOT | cut -c -16
${{ env.POETRY_VERSION }}
EOT
)
echo "INSTALL_CACHE_HASH=$HASH" >> $GITHUB_ENV
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Cache Installations
id: cache-installs
uses: actions/cache@v4
with:
path: ~/.local
key: install-${{ env.INSTALL_CACHE_HASH }}-0
- name: Install Poetry
if: steps.cache-installs.outputs.cache-hit != 'true'
run: |
curl -sSL https://install.python-poetry.org | python3 - --version ${{ env.POETRY_VERSION }}
- name: Test poetry run
run: poetry --version
- name: Checkout source
uses: actions/checkout@v4
with:
fetch-depth: 1
- name: Install dask-ms complete
run: poetry install --extras "testing complete"
- name: Test dask-ms applications
run: poetry run py.test -s -vvv --applications daskms/
# - name: Debug with tmate on failure
# if: ${{ failure() }}
# uses: mxschmitt/action-tmate@v3
deploy:
needs: [test, test_apps]
runs-on: ubuntu-latest
# Run on a push to a tag or master
if: >
github.event_name == 'push' &&
(startsWith(github.event.ref, 'refs/tags') ||
github.event.ref == 'refs/heads/master')
steps:
- name: Set up Python 3.11
uses: actions/setup-python@v5
with:
python-version: 3.11
- name: Install Poetry
uses: abatilo/actions-poetry@v3
with:
poetry-version: ${{ env.POETRY_VERSION }}
- name: Checkout source
uses: actions/checkout@v4
with:
fetch-depth: 1
- name: Build distributions
run: poetry build
- name: Publish distribution 📦 to Test PyPI
uses: pypa/gh-action-pypi-publish@master
with:
user: __token__
password: ${{ secrets.test_pypi_token }}
repository_url: https://test.pypi.org/legacy/
continue-on-error: true
- name: Publish distribution 📦 to PyPI
uses: pypa/gh-action-pypi-publish@master
if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
with:
user: __token__
password: ${{ secrets.pypi_token }}