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shells to run heckle (slurm & others) and initialisations files

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rochSmets/myHeckle

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MyHeckle

env var & characteristics for each machine :

xombul

HECKLE_LDFLAG="-lhdf5" HECKLE_IFLAG="-I/usr/include -I/usr/local/include" HECKLE_CC="/usr/bin/mpicc" RAM : 8 Gb cores : 8

krazucky

HECKLE_CC="/usr/lib64/openmpi/bin/mpicc" HECKLE_IFLAG="-I/usr/include/openmpi-x86_64/" HECKLE_LDFLAG="-L/usr/lib64/ -lhdf5"

ada

module load hdf5/mpi/1.8.9 HECKLE_LDFLAG=$WRAPPER_LDFLAGS HECKLE_IFLAG=$WRAPPER_FFLAGS HECKLE_CC="/smplocal/pub/Modules/IDRIS/wrappers/mpiicc" RAM : 3.5 Gb per core (max) cores : multiple of 32 see : www.idris.fr/ada/ada-news-class.html

hopper

module load mvapich2/gcc/64/2.1rc1 cmake/3.5.0 hdf5-mvapich/1.10.5 export HECKLE_CC=$MPI_HOME"/bin/mpicc" export HECKLE_IFLAG="-I"$HDF5INCLUDE export HECKLE_LDFLAG="-L "$HDF5LIB" -lhdf5" RAM : 64 Gb cores : 32 max of 4 nodes=128 cores per run class small ( 32 cores, 30 days) class medium ( 96 cores, 10 days) class large (128 cores, 2 days)

zoidberg

HECKLE_LDFLAG="-L$MPI_LIB -L$HDF5LIB -lhdf5" HECKLE_IFLAG="-I$MPI_INCLUDE -I$HDF5INCLUDE" HECKLE_CC="$MPI_BIN/mpicc" RAM : 256 Gb cores : 64 walltime : 72h

nin

HECKLE_LDFLAG= HECKLE_IFLAG= HECKLE_CC= RAM : Gb cores :

occigen

module load intel/17.1 module load openmpi/intel/2.0.1 module load hdf5/1.8.18 HECKLE_LDFLAG="-L$MPIROOT/lib -L$HDF5_DIR/lib -lhdf5" HECKLE_IFLAG="-I$MPIROOT/include -I$HDF5_DIR/include" HECKLE_CC="mpicc" RAM : 2.6 Gb per core cores : biproc of 12 cores

irene knl

module sw feature/openmpi/net/bxi module load flavor/hdf5/parallel module load hdf5 HECKLE_LDFLAG="$HDF5_LDFLAGS" HECKLE_IFLAG="$HDF5_CFLAGS" HECKLE_CC="$CCC_MPICC"

TODO :

sti : HybParam st1 : Grid1 st2 : Grid2 stp : Particle std : TimeDiag stx : CommParam

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