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1. multitargetCRISPR multitargetCRISPR Public

   Companion code for "Massively parallel genomic perturbations with multi-target CRISPR reveal new insights on Cas9 activity and DNA damage responses at endogenous sites."

   Python 2

2. DSeqPlus DSeqPlus Public

   Companion code for "Improving the sensitivity of in vivo CRISPR off-target detection with DISCOVER-Seq+"

   Python 1

3. chipseq_cgRNA chipseq_cgRNA Public

   Companion code for "Very fast CRISPR on demand"

   Python

4. chipseq_pcRNA chipseq_pcRNA Public

   Companion code for "Cas9 deactivation with photocleavable guide RNAs"

   Python

5. blender blender Public

   Forked from staciawyman/blender

   BLENDER is a companion program to the DISCOVER-Seq assay to identify off-target editing sites from MRE11 ChIP-Seq experiments.

   Perl

6. cell-sheet-tracker cell-sheet-tracker Public

   Source code for "Deformable graph model for tracking epithelial cell sheets in fluorescence microscopy"

   MATLAB 1