Merge pull request #112 from ptagliolato/dev #286
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| # Workflow derived from https://github.com/r-lib/actions/tree/master/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| on: | |
| push: | |
| pull_request: | |
| branches: [main] | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macOS-latest, r: 'release', usgs_user: 'modistsp_ci_macos_release', test_mode: 'FALSE'} | |
| - {os: windows-latest, r: 'release', usgs_user: 'modistsp_ci_windows_release', test_mode: 'FALSE'} | |
| - {os: ubuntu-20.04, r: 'devel', usgs_user: 'modistsp_ci_ubuntu_release', test_mode: 'FALSE', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} | |
| - {os: ubuntu-20.04, r: 'release', usgs_user: 'modistsp_ci_ubuntu_devel', test_mode: 'FALSE', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} | |
| - {os: ubuntu-20.04, r: 'oldrel', usgs_user: 'modistsp_ci_ubuntu_oldrel', test_mode: 'FALSE', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| USGS_USER: ${{ matrix.config.usgs_user }} | |
| USGS_PASSWORD: ${{ secrets.USGS_PASSWORD }} | |
| R_KEEP_PKG_SOURCE: yes | |
| LOCAL_DEIMS: ${{ matrix.config.test_mode }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| - name: Install remotes | |
| run: | | |
| Rscript -e "install.packages('remotes', repos='https://ftp.belnet.be/mirror/CRAN')" | |
| - name: Install MODIStsp | |
| run: | | |
| Rscript -e "remotes::install_url('https://cran.r-project.org/src/contrib/Archive/MODIStsp/MODIStsp_2.1.0.tar.gz')" | |
| - name: Query dependencies | |
| run: | | |
| install.packages("remotes") | |
| webshot::install_phantomjs() | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), "depends.Rds", version = 2) | |
| shell: Rscript {0} | |
| - name: Install other dependencies | |
| run: | | |
| if (Sys.info()["sysname"]=="Darwin") {options("pkgType" = "binary")} | |
| remotes::install_deps(dependencies = TRUE) | |
| remotes::install_cran("rcmdcheck") | |
| shell: Rscript {0} | |
| - name: "Cache R packages" | |
| if: runner.os != 'Windows' | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
| - name: "[Linux] Install system dependencies" | |
| if: runner.os == 'Linux' | |
| run: | | |
| while read -r cmd | |
| do | |
| eval sudo $cmd | |
| done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') | |
| - name: download system packages | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt update | |
| sudo apt-get install \ | |
| r-base-dev \ | |
| build-essential \ | |
| gdal-bin \ | |
| libgdal-dev \ | |
| libjq-dev \ | |
| libssl-dev \ | |
| libxml2-dev \ | |
| libprotobuf-dev \ | |
| protobuf-compiler \ | |
| libv8-dev \ | |
| libssl-dev \ | |
| libcairo2-dev \ | |
| libgit2-dev | |
| - uses: r-lib/actions/check-r-package@v2 |