unable to run “gn_parse_tidy” #24
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Can you please provide the command (and any associated code) that you tried to run that resulted in the error? It looks like you have an object called |
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As indicated in the value of |
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Hi,
Yes for sure.
here is my codes:
setwd("D:/SimaSohrabi/Herbicide resistance")> herbicide_resistant_data<- readXL("herbicide resistant taxon_SS.xlsx",rownames = FALSE, header = TRUE, na = "", sheet = "Data",stringsAsFactors = FALSE)> Taxa <- as.data.frame(unique(herbicide_resistant_data$Taxon))> colnames(Taxa)<-"Taxon"> Taxa$ID_mvk <- seq(1, length(Taxa$Taxon), by=1)> df <- gn_parse_tidy(Taxa$Taxon)Error in sys::exec_internal(find_gnparser(), ...) :
Executing 'C:\Users\DR
Gherekhloo\AppData\Roaming\gnparser\gnparser.exe' failed with status 2
Thank you,
sima
…On Wed, May 10, 2023 at 2:20 AM Joel Nitta ***@***.***> wrote:
As indicated in the value of df in the OP, df is a function from the stats
package (
https://github.com/rho-devel/rho/blob/bf6c652b826cd892e88630eb35f182b614af52b1/src/library/stats/R/distn.R#L199
)
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--
Sima Sohrabi
PhD (Weed Science )
Ferdowsi Univ. of Mashhad
Dept. of Agronomy Faculty of Agriculture
P.O.Box:91775-1163
Fax:+98 5118787430
Mashhad
IRAN
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Are you able to run the example code below? x <- c("Quadrella steyermarkii (Standl.) Iltis & Cornejo",
"Parus major Linnaeus, 1788", "Helianthus annuus var. texanus")
gn_parse_tidy(x) |
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Hi,
No, I can't. The error message is the same.
x <- c("Quadrella steyermarkii (Standl.) Iltis & Cornejo",+ "Parus major Linnaeus, 1788", "Helianthus annuus var. texanus")> gn_parse_tidy(x)Error in sys::exec_internal(find_gnparser(), ...) :
Executing 'C:\Users\DR
Gherekhloo\AppData\Roaming\gnparser\gnparser.exe' failed with status 2
gn_parse_tidy <http://localhost:11984/session/bared-pika_reprex_preview.html?viewer_pane=1&capabilities=1&host=http%3A%2F%2F127.0.0.1%3A27095#cb1-2>#>
Error in eval(expr, envir, enclos): object 'gn_parse_tidy' not found
Thank you
…On Thu, May 11, 2023 at 11:42 AM Joel Nitta ***@***.***> wrote:
Are you able to run the example code below?
x <- c("Quadrella steyermarkii (Standl.) Iltis & Cornejo",
"Parus major Linnaeus, 1788", "Helianthus annuus var. texanus")
gn_parse_tidy(x)
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<#24 (comment)>,
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You are receiving this because you authored the thread.Message ID:
***@***.***>
--
Sima Sohrabi
PhD (Weed Science )
Ferdowsi Univ. of Mashhad
Dept. of Agronomy Faculty of Agriculture
P.O.Box:91775-1163
Fax:+98 5118787430
Mashhad
IRAN
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@SimaSohrabi there have been several changes to the package since you filed this issue. Can you try installing the latest development version with |
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During run the “gn_parse_tidy”, Its showing the following error.
Error in sys::exec_internal(find_gnparser(), ...) :
Executing 'C:\Users\DR Gherekhloo\AppData\Roaming\gnparser\gnparser.exe' failed with status 2
df
#> function (x, df1, df2, ncp, log = FALSE)
#> {
#> if (missing(ncp))
#> .Call(C_df, x, df1, df2, log)
#> else .Call(C_dnf, x, df1, df2, ncp, log)
#> }
#> <bytecode: 0x00000000090f84b8>
#> <environment: namespace:stats>
sessionInfo()
R version 4.3.0 beta (2023-04-09 r84208 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252
time zone: Asia/Tehran
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] reprex_2.0.2 rWCVP_1.2.4 rgnparser_0.2.6 RcmdrMisc_2.7-2 sandwich_3.0-2
[6] car_3.1-2 carData_3.0-5
loaded via a namespace (and not attached):
[1] DBI_1.1.3 ada_2.0-5 gridExtra_2.3
[4] readxl_1.4.2 rlang_1.1.0 magrittr_2.0.3
[7] e1071_1.7-13 compiler_4.3.0 RSQLite_2.3.1
[10] callr_3.7.3 vctrs_0.6.1 stringr_1.5.0
[13] pkgconfig_2.0.3 fastmap_1.1.1 backports_1.4.1
[16] utf8_1.2.3 rmarkdown_2.21 prodlim_2023.03.31
[19] tzdb_0.3.0 ps_1.7.5 haven_2.5.2
[22] purrr_1.0.1 bit_4.0.5 xfun_0.38
[25] cachem_1.0.7 jsonlite_1.8.4 blob_1.2.4
[28] styler_1.9.1 parallel_4.3.0 cluster_2.1.4
[31] R6_2.5.1 stringi_1.7.12 parallelly_1.35.0
[34] rpart_4.1.19 cellranger_1.1.0 Rcpp_1.0.10
[37] knitr_1.42 future.apply_1.10.0 zoo_1.8-11
[40] R.utils_2.12.2 base64enc_0.1-3 readr_2.1.4
[43] R.cache_0.16.0 Matrix_1.5-4 splines_4.3.0
[46] nnet_7.3-18 tidyselect_1.2.0 yaml_2.3.7
[49] rstudioapi_0.14 abind_1.4-5 codetools_0.2-19
[52] processx_3.8.0 listenv_0.9.0 lattice_0.21-8
[55] tibble_3.2.1 withr_2.5.0 evaluate_0.20
[58] foreign_0.8-84 future_1.32.0 survival_3.5-5
[61] sf_1.0-12 units_0.8-1 proxy_0.4-27
[64] xml2_1.3.3 pillar_1.9.0 KernSmooth_2.23-20
[67] checkmate_2.1.0 nortest_1.0-4 generics_0.1.3
[70] phonics_1.3.10 rWCVPdata_0.3.1 hms_1.1.3
[73] ggplot2_3.4.2 munsell_0.5.0 scales_1.2.1
[76] ff_4.0.9 globals_0.16.2 xtable_1.8-4
[79] class_7.3-21 glue_1.6.2 RecordLinkage_0.4-12.4
[82] clipr_0.8.0 Hmisc_5.0-1 tools_4.3.0
[85] sys_3.4.1 data.table_1.14.8 forcats_1.0.0
[88] fs_1.6.1 grid_4.3.0 tidyr_1.3.0
[91] ipred_0.9-14 colorspace_2.1-0 htmlTable_2.4.1
[94] Formula_1.2-5 cli_3.6.1 evd_2.3-6.1
[97] fansi_1.0.4 lava_1.7.2.1 gt_0.9.0
[100] dplyr_1.1.1 gtable_0.3.3 R.methodsS3_1.8.2
[103] digest_0.6.31 classInt_0.4-9 htmlwidgets_1.6.2
[106] R.oo_1.25.0 memoise_2.0.1 htmltools_0.5.5
[109] lifecycle_1.0.3 bit64_4.0.5 MASS_7.3-58.4
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