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1. gifford-lab/prescient gifford-lab/prescient Public

   Codebase for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs) for generative modeling of single-cell time-series.

   Python 44 7

2. gifford-lab/prescient-analysis gifford-lab/prescient-analysis Public

   Notebooks for pre-processing, analysis, and visualization of PRESCIENT applied to in vitro hematopoeisis (Weinreb et al. 2020) and in vitro beta-cell differentiation (Veres et al. 2019).

   Jupyter Notebook 4 4

3. gifford-lab/FactorizableLibrary gifford-lab/FactorizableLibrary Public

   Forked from zheng-dai/FactorizableLibrary

   Code and data for factorizable libraries

   Jupyter Notebook 3

4. gimelbrantlab/magic gimelbrantlab/magic Public

   Tool to identify monoallelic expression in polyclonal samples using ChIP-Seq data.

   R 5 5

5. nfkb-tag-seq nfkb-tag-seq Public

   Code for processing and analysis of TAGseq data in "The Effects of IKKβ Inhibition on Early NF-κB Activation and Transcription of Downstream Genes". Modified repository from https://github.com/z0on…

   R 3 1

6. sachitsaksena.github.io sachitsaksena.github.io Public

   Personal website hosted at: sachitsaksena.github.io. Blog posts by Jekyll. Custom layout using Tachyons CSS toolkit.

   1