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NobBS v. 1.0.0

Updates to v. 0.1.0 (Initial Release) are major fixes to remove deprecated tidyverse functions, replacing group_by_ with group_by(!!sym()) and vars_select with standard select.

NobBS v. 0.1.0 (Initial Release)

See README.md for a full tutorial on using the NobBS package.

Updates to the development version include:

  • A function for stratified Bayesian nowcasting, NobBS.strat
  • An argument to specify the proportion_reported and inflate the estimated cases by that factor, important in outbreaks with severe under-reporting or asymptomatic cases.
  • Additional checks and warnings issued for impossible temporal combinations of moving window sizes, maximum delay D, and the length of the time series.
  • Warning issued when a case onset week is skipped in the time series or is missing reports altogether.
  • Plot examples

NobBS v. 0.0.0.9000 (Development)

NobBS (Nowcasting by Bayesian Smoothing) is a new R package that produces smooth Bayesian nowcasts of incomplete, time-stamped reporting data implemented from McGough et al. 2019.