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Hi, I have just stared using Seurat v4.0 and I'm having trouble with the CreateSeuratObject command. The error message reads: Error in CreateSeuratObject(counts = pbmc.data, project = "pbmc3k", min.cells = 3, : could not find function "CreateSeuratObject" Could you please help me troubleshoot this one? #3798

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nikita421 opened this issue Dec 6, 2020 · 2 comments
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@nikita421
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nikita421 commented Dec 6, 2020

Issue with CreateSeuratObject

@nikita421 nikita421 changed the title Hi, Hi, I have just stared using Seurat v4.0 and I'm having trouble with the CreateSeuratObject command. The error message reads: Error in CreateSeuratObject(counts = pbmc.data, project = "pbmc3k", min.cells = 3, : could not find function "CreateSeuratObject" Could you please help me troubleshoot this one? Dec 6, 2020
@bassanio
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bassanio commented Dec 7, 2020

Have you loaded Seurat after successful installation. Try running the below command

library(Seurat)
pbmc3k <-CreateSeuratObject(counts = pbmc.data, project = "pbmc3k", min.cells = 3)

if the above didn't worked . run below command and post here

sessionInfo()

P.S: it will be great if you can post the tittle in comment session and comment as tittle

@timoast timoast added the more-information-needed We need more information before this can be addressed label Dec 11, 2020
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no-response bot commented Dec 25, 2020

This issue has been automatically closed because there has been no response to our request for more information from the original author. With only the information that is currently in the issue, we don't have enough information to take action. Please reach out if you have or find the answers we need so that we can investigate further.

@no-response no-response bot closed this as completed Dec 25, 2020
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