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slicewise should be 0 for MT1 to MT0 #22

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jcohenadad opened this issue Apr 10, 2024 · 0 comments
Open

slicewise should be 0 for MT1 to MT0 #22

jcohenadad opened this issue Apr 10, 2024 · 0 comments

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@jcohenadad
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spine-park/batch_processing.sh

Lines 146 to 151 in 8e541e9

sct_register_multimodal -i "${file_mt1}".nii.gz \
-d "${file_mt0}".nii.gz \
-dseg "${file_mt0}"_seg.nii.gz \
-param step=1,type=im,algo=rigid,slicewise=1,metric=CC \
-x spline \
-qc "${PATH_QC}"

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