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  1. Extant_Sequence_Reconstruction_ESR Extant_Sequence_Reconstruction_ESR Public

    Calculate conditional probability distributions of extant sequences given a phylogenetic tree, sequence alignment, and evolutionary model.

    Python 2

  2. DRAUPNIR_ASR DRAUPNIR_ASR Public

    Forked from LysSanzMoreta/DRAUPNIR_ASR

    Ancestral protein sequence reconstruction using a tree-structured Ornstein-Uhlenbeck variational autoencoder

    Python

  3. Column_Cross_Validation_LOCO_XV Column_Cross_Validation_LOCO_XV Public

    A new model-selection criteria for phylogenetics to calculate the predictive log-likelihood score.

    Python

  4. KPoP_SELS KPoP_SELS Public

    Kimura POpulation and Protein Structures Evolve via Linked Sites

    Python

  5. StockPred_LSTM StockPred_LSTM Public

    Take in stock information and make a prediction on whether the stock will decrease by 5%, decrease by 2%, increase by 2%, increase by 5%, or remain unchanged.

    Jupyter Notebook