v0.19.3

What's Changed

• Fix the default rRNA by @cokelaer in #44

Full Changelog: v0.19.2...v0.19.3

v0.19.2

What's Changed

• Fix bowtie1 regression (log). by @cokelaer in #39
• Fix typo for multiqc bowtie2 paired reports by @cokelaer in #41

Full Changelog: v0.19.1...v0.19.2

v0.19.1

What's Changed

• add rnaseqc container and update rseqc by @cokelaer in #38

Full Changelog: v0.19.0...v0.19.1

v0.19.0

What's Changed

• Refactorisation to use click by @cokelaer in #37

Full Changelog: v0.18.1...v0.19.0

v0.18.1

What's Changed

• Fix Annotation plot, add new expression plot by @cokelaer in #35

Full Changelog: v0.18.0...v0.18.1

v0.18.0

What's Changed

• Fixes #31 and #15 by @cokelaer in #32

Full Changelog: v0.17.2...v0.18.0

v0.17.2

What's Changed

• Fix options not used in star_mapping by @cokelaer in #30 to limit the memory usage at the sorting stage.

Full Changelog: v0.17.1...v0.17.2

v0.17.1

What's Changed

• move containers in the config file by @cokelaer in #25
• Fixing CI action (apptainer) by @cokelaer in #27
• update new apptainer for graphviz by @cokelaer in #29

Full Changelog: v0.17.0...v0.17.1

v0.17.0

What's Changed

• Fix strand balance automatic selection bug by @cokelaer in #19
• Fix python3.8 and 3.9 requirements by @cokelaer in #22
• update workflow to use fastp wrapper by @cokelaer in #24
• Fully integrated singularity/apptainer containers

Full Changelog: v0.16.0...v0.17.0

v0.16.0

What's Changed

• refactorisation to include containers and latest wrappers

Full Changelog: v0.15.2...v0.16.0