upgrade to Julia 0.7

v0.7.0

add dependency of FileIO

Julia 0.6 release

upgrade to Julia 0.6

Julia 0.5

Merge pull request #9 from tkelman/patch-1

add FixedPointNumbers 0.3 to REQUIRE

last version for Julia 0.4

v0.0.5

fix visualizing image

clearer variable name

• tested by processing 10% Pinky dataset.

less dependency

• removed some dependency, especially PyCall
• use plugins to contain dependency code
• add Tsgm to represent segmentation with mst
• add type to represent error curve
• match IO function to each type

working with spipe

• add aws functions
• parallelize some functions
• works with znn julia to plot error curves

basic functions

• IO of tif and hdf5 files
• show 2D image
• segment affinity using connected component and watershed (need Watershed.jl)
• compute evaluation metrics including rand error, rand index, rand f score, variation f score
• segment boundary map using connected component
• blend raw image and segmentation indexed image to RGB image

serial basic functions

this is a backup release of master branch.
basic functions using serial computation.