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Replace python -m bio2zarr vcf2zarr with python -m bio2zarr.vcf2zarr? #203

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jeromekelleher opened this issue May 14, 2024 · 2 comments

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@jeromekelleher
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I.e., make each command a subpackage, and give those subpackages an __main__ definition. This seems like a more rational approach to organising things, but it does mean that encapsulating all the CLI functionality in the cli.py module as we do now (which has a lot of advantages) may not be possible.

@jeromekelleher
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Note: if we do, get rid of the note on installation.md linking to this issue.

@benjeffery
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I feel like the space is more natural than the . but it's not a strongly held opinion. Nice to have all the cli in one file too.

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