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LocalScratch Permission problem #1

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dyt811 opened this issue Jul 18, 2014 · 2 comments
Closed

LocalScratch Permission problem #1

dyt811 opened this issue Jul 18, 2014 · 2 comments

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@dyt811
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dyt811 commented Jul 18, 2014

Hi, Pierre.

The demo-script problem seems to still persist with regard to the local temporary folder. I have attached the issue from last time as well as this time for documentation purposes.

Issue Thursday:
screenshot 2014-07-16 16 15 26

Issue this time, after sourcing from quarantine:
screenshot 2014-07-17 22 56 53

Issue this time, after sourcing directly from latest pulled GitHub fork (as of 2014-07-17 22:50):
screenshot 2014-07-17 22 57 07

@pbellec
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pbellec commented Jul 18, 2014

hi Yang,

The problem I found in the config was not with NIAK, but with the MINC quarantine, and more specifically in the sh script we're sourcing to configure the tool. Would it be possible by any chance that you made a local copy of the quarantine or the config script ?

@dyt811
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dyt811 commented Jul 18, 2014

Thanks a lot! Yup. That fixed everything. I just fixed .bashrc to source the quarntain folder and so far it is happily chugging along the tasks and all T1 preprocessing part are going through fine. 👯

I will give a more thorough report when everything finishes.

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