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[r] Fix query conditions on enumerated columns #1867

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johnkerl opened this issue Nov 5, 2023 · 3 comments
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[r] Fix query conditions on enumerated columns #1867

johnkerl opened this issue Nov 5, 2023 · 3 comments
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blocks-1.5 bug Something isn't working r-api

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@johnkerl
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johnkerl commented Nov 5, 2023

Works in Python: https://gist.github.com/johnkerl/3d1279b0e3bd9e599d541774419faa54
Not in R: https://gist.github.com/johnkerl/d22373ff55cca23cd23672dae547b3de

Note s3://tiledb-johnkerl/s/v/pbmc3k in the above gists is nothing other than tiledbsoma.io.from_h5ad of
https://github.com/single-cell-data/TileDB-SOMA/blob/main/apis/python/testdata/pbmc3k.h5ad

Needs:

  • Bugfix
  • Unit-test coverage

See also #1862

@johnkerl
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johnkerl commented Nov 5, 2023

[sc-36509]

This was referenced Nov 6, 2023
@eddelbuettel
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Fixed by TileDB-Inc/TileDB-R#614 as the actual parsing is done in the tiledb package.

@johnkerl
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johnkerl commented Nov 6, 2023

@eddelbuettel thanks! Looking forward to closing this issue once this functionality is available in TileDB-SOMA. (Remaining PRs including apis/R/DESCRIPTION in this repo, and unit-test coverage in this repo, after you've got TileDB-R tagged & in Conda.)

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