Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

fix: Detect pandas availability to select serializer #2300

Merged
merged 5 commits into from Jun 16, 2023
Merged

fix: Detect pandas availability to select serializer #2300

Changes from 2 commits
Commits
Show all changes
5 commits
Select commit Hold shift + click to select a range
db38541
Detect pandas availability to select serializer
DrYak Jun 14, 2023
fd138e2
Merge branch 'main' into fix_pandas_missing
johanneskoester Jun 14, 2023
c13344a
fmt
johanneskoester Jun 14, 2023
7e12344
chore: skip azure tests on forks
johanneskoester Jun 14, 2023
d371757
use get for checking credentials
johanneskoester Jun 15, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Jump to
Jump to file
Failed to load files.
Diff view
Diff view
10 changes: 6 additions & 4 deletions snakemake/persistence.py
View file
Open in desktop
Expand Up @@ -35,10 +35,12 @@ def __init__(
shadow_prefix=None,
warn_only=False,
):
try:
self._serialize_param = self._serialize_param_pandas
except ModuleNotFoundError:
self._serialize_param = self._serialize_param_builtin
import importlib.util
self._serialize_param = (
self._serialize_param_pandas
if importlib.util.find_spec("pandas") is not None
else self._serialize_param_builtin
)

self._max_len = None

Expand Down