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Redesigned HTML reports, with improved interface and performance.
For big data, HTML reports can now be stored as ZIP, where files are not anymore embedded but rather are stored in an auxilliary folder, such that they don't have to be in memory during report rendering.
Added subcategories to report (see docs).
Fixed a bug linter, leading to only one rule or snakefile to be linted.
Breaking change in CLI: added flags --conda-cleanup-envs and --conda-cleanup-pkgs, removed flag --cleanup-conda.
Fixed scheduling of pipe jobs, they are now always scheduled, fixing a hangup.
Corrected quoting of shell command for cluster submission.
