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Add more algorithms #8

Merged
merged 14 commits into from
Dec 28, 2022
Merged

Add more algorithms #8

merged 14 commits into from
Dec 28, 2022

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adamwawrzynski
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@adamwawrzynski adamwawrzynski commented Dec 22, 2022 •
edited

Description

Add more algorithms from captum package.

How Has This Been Tested?

Please describe the tests that you ran to verify your changes.

  • manual UI testing

Checklist:

  • I have updated all related pyproject.toml files.
  • I have updated lock files.
  • I have set an Assignee and Reviewers.
  • I have labeled the PR correctly.
  • I have performed a self-review of my own code.
  • I have covered my code and changes with unit tests.
  • I have annotated types as extensively as possible.
  • I have commented my code, particularly in hard-to-understand areas.
  • I have made corresponding changes to the documentation.
  • My changes generate no new warnings.
  • All code references and dependencies will work.

Adam Wawrzyński added 8 commits December 22, 2022 16:19
Change kwargs argument name, unify 'layer' argument name passed to ex…
f3fdc1d 
…plainers

Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Fix docstrings of create_explainer function
a2d09e0 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Add Saliency algorithm
2907bde 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Add DeepLIFT algorithm
bc6c616 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Add DeepLIFT SHAP algorithm
9c2fca2 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Add Deconvolution algorithm
526fe50 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Add Input x Gradient algorithm
348e323 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Add Layer Conductance algorithm
f129175 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
@adamwawrzynski adamwawrzynski self-assigned this Dec 22, 2022
Add standardization of matrices, generate figure with respect to pres…
0c7609a 
…ence of negative attributions

Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
@adamwawrzynski adamwawrzynski added enhancement New feature or request bug Something isn't working labels Dec 23, 2022
@adamwawrzynski adamwawrzynski marked this pull request as ready for review December 23, 2022 11:09
kamilrzechowski
kamilrzechowski approved these changes Dec 27, 2022
View reviewed changes
src/explainer/base_explainer.py Outdated Show resolved Hide resolved
src/explainer/conductance.py Outdated Show resolved Hide resolved
Adam Wawrzyński added 2 commits December 28, 2022 15:16
Revert visualization error handling due to #12 PR
2232aa8 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Mark model argument type with TODO
6404c06 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
@adamwawrzynski adamwawrzynski removed the bug Something isn't working label Dec 28, 2022
Adam Wawrzyński added 3 commits December 28, 2022 16:24
Merge branch 'main' into feat/captum_more_algorithms
2cdbb7f 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Remove incorrect standardization method
56a15df 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
Bump patch version
3ca6ff9 
Signed-off-by: Adam Wawrzyński <adam.wawrzynski@reasonfieldlab.com>
@adamwawrzynski adamwawrzynski merged commit 4b54012 into main Dec 28, 2022
@rozek1997 rozek1997 deleted the feat/captum_more_algorithms branch January 16, 2023 18:19
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Reviewers

@kamilrzechowski kamilrzechowski kamilrzechowski approved these changes

@adamjankaczmarek adamjankaczmarek Awaiting requested review from adamjankaczmarek

@rpytel1 rpytel1 Awaiting requested review from rpytel1

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@adamwawrzynski adamwawrzynski

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@adamwawrzynski @kamilrzechowski