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@luizirber luizirber released this 22 Nov 23:19
v2.3.0
57f6efc
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Features:

  • Add hp encoding for proteins (#758)
  • Add sourmash signature filter to do abundance filtering. (#748)
  • add a --abundances-from flag to sourmash signature intersect, to preserve abundances (#747)

Improvements:

  • Include more base deps: numpy, scipy and matplotlib (#770)
  • bam2fasta package to simplify sourmash compute (#768)
  • Optimize KmerMinHash add_sequence (#744)

Bugs:

  • Force signature order in test_sig_filter_1 to fix heisenbug (#761)
  • save_signatures with a file opened in binary mode fails (#746)
  • saved fasta files incorrectly (#740)
  • Bug: segfault with set_abundances (#745)

Build, CI and docs:

  • update cibuildwheel (#774)
  • Fix asv benchmarks (#509) (#759)
  • add the f1000 paper (#739)
  • release docs update (#554)

Rust changes:

  • Experimental SBT with MQF internal nodes in Rust (#772)
  • Fixes for WASI compilation (#771)
  • changes to rust code from core/rust branch (#760)
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