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1. vnet-keras vnet-keras Public

   Bash and python scripts to run a keras-implemented V-Net 3D segmentation model.

   Python 9 4

2. rainbow rainbow Public

   A pipeline for rare genetic disease analysis.

   Python 2 1

3. scBSC scBSC Public

   Calculate spatial correlation between two genes of a Seurat-format spatial scRNA-seq data

   R 1

4. mutationtimer_pipeline mutationtimer_pipeline Public

   Pipeline for feeding Isabl data into MutationTimeR (https://github.com/gerstung-lab/MutationTimeR)

   Python 1

5. tumor-seg-web tumor-seg-web Public

   Brain tumor segmentation web service to predict the segmentation of 3D brain MRI images.

   Python 3

6. shahcompbio/ontmont shahcompbio/ontmont Public

   ONT split read analysis

   Python 1