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@spakowiczlab

Spakowicz Lab

OSU academic research lab studying how the microbiome interacts with the immune system, particularly as it relates to cancer and response to immunotherapies

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  1. tmesig tmesig Public

    Tumor Microenvironment expression signatures

    R

  2. mt.surv mt.surv Public

    R package for a multi-threshold survival area analysis

    R

  3. exohnsc exohnsc Public

    Code related to the study of the tumor microbiome and head and neck cancer

  4. exotic exotic Public

    Make functions utilized in the exotic pipeline available through package format

    R 2

  5. mhealth-iit mhealth-iit Public

    R Shiny app to support the use of mobile health data in academic clinical trials. This tool enables one to obtain consent to share user's FitBit data with the research team.

    R

Repositories

Showing 10 of 26 repositories
  • fitness Public

    analysis related to the FITNESS Study at OSU

    spakowiczlab/fitness’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Nov 1, 2024
  • lab-logistics Public

    Coding and structure conventions in the lab

    spakowiczlab/lab-logistics’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Oct 24, 2024
  • mimic Public
    spakowiczlab/mimic’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Oct 22, 2024
  • tmesig Public

    Tumor Microenvironment expression signatures

    spakowiczlab/tmesig’s past year of commit activity
    R 0 0 6 0 Updated Oct 1, 2024
  • modbio Public

    Power, data processing and analyses related to the "modbio" companion to the INSIGNA clinical trial

    spakowiczlab/modbio’s past year of commit activity
    R 0 MIT 0 0 0 Updated Aug 27, 2024
  • atbac Public
    spakowiczlab/atbac’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jul 19, 2024
  • exorien-melio Public
    spakowiczlab/exorien-melio’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Jun 27, 2024
  • exorien-recrad Public

    Code for processing and analyses associated with the recrad project

    spakowiczlab/exorien-recrad’s past year of commit activity
    0 MIT 0 0 0 Updated May 20, 2024
  • exotic Public

    Make functions utilized in the exotic pipeline available through package format

    spakowiczlab/exotic’s past year of commit activity
    R 2 MIT 0 0 0 Updated May 1, 2024
  • microsig Public

    This package contains functions to calculate microbe signatures, particularly from bugsigdb inputs.

    spakowiczlab/microsig’s past year of commit activity
    R 0 MIT 0 0 0 Updated Mar 11, 2024
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