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History / Related individuals

Revisions

  • Related individuals: long-range LD correction of h2 and rg SEs, rg with relatives in manifest mode and across complete-case samples, local ancestry (SUMMIT main cadd1e0)

  • Related individuals: --inbreeding for rg and --per-snp, cross-m12 --annot (SUMMIT main 13674e8) Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

    @bronsonj98 bronsonj98 committed Oct 27, 2026
  • Related individuals: optional --inbreeding (SUMMIT main 9361506) Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

    @bronsonj98 bronsonj98 committed Oct 27, 2026
  • Related individuals: exact one-pass REL_M per complete-case sample (SUMMIT main f9858ae)

  • Related individuals: V weights note (SUMMIT main b35a698)

  • Related individuals: one REL_M value per trait by default (SUMMIT main c509103)

  • Publish the related-individuals guide and sync all pages with SUMMIT main cbfa8ec New pages: Related individuals (after h2 and rg in Analyses) and Generalized cross-trait PCGC. Benchmarks and Real-data results gain preprint figures. LD scores, Input files, h2 and rg, Methods and Commands document SNP-variance weights, the covariate rank and related pairs. G×E, PCGC and Python API pages pick up the transport correction and the between-block standard errors already on main. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>