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@srnas

Small RNAs in silico

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  1. barnaba barnaba Public

    Analyse Nucleic Acids Structure and Simulations with baRNAba

    Jupyter Notebook 41 15

  2. ff ff Public

    Force Fields

    Shell 13 8

  3. spqr spqr Public

    Simulation code for the prediction of RNA structures.

    C 10 3

  4. dftb-pucker-corrections dftb-pucker-corrections Public

    Corrections for RNA pucker using DFTB

    Shell 1

Repositories

Showing 10 of 12 repositories
  • spqr Public

    Simulation code for the prediction of RNA structures.

    srnas/spqr’s past year of commit activity
    C 10 GPL-3.0 3 0 0 Updated Oct 29, 2024
  • barnaba Public

    Analyse Nucleic Acids Structure and Simulations with baRNAba

    srnas/barnaba’s past year of commit activity
    Jupyter Notebook 41 GPL-3.0 15 14 3 Updated Mar 20, 2024
  • ff Public

    Force Fields

    srnas/ff’s past year of commit activity
    Shell 13 8 0 0 Updated Oct 25, 2022
  • tetraloops-trajectories Public
    srnas/tetraloops-trajectories’s past year of commit activity
    1 0 2 0 Updated Apr 3, 2022
  • shape-md Public
    srnas/shape-md’s past year of commit activity
    0 0 0 0 Updated Apr 3, 2022
  • rna-enhanced-sampling Public
    srnas/rna-enhanced-sampling’s past year of commit activity
    TeX 0 1 0 0 Updated Dec 20, 2017
  • oligonucleotides-kinetics Public

    IPython analysis notebooks for Markov state models of oligonucletides

    srnas/oligonucleotides-kinetics’s past year of commit activity
    Jupyter Notebook 5 1 0 0 Updated Aug 28, 2017
  • plumed2 Public Forked from plumed/plumed2

    Public branches developed in our group

    srnas/plumed2’s past year of commit activity
    0 290 0 0 Updated Jun 6, 2017
  • dftb-pucker-corrections Public

    Corrections for RNA pucker using DFTB

    srnas/dftb-pucker-corrections’s past year of commit activity
    Shell 1 0 0 0 Updated Jul 26, 2016
  • 4nt-trajectories Public

    Trajectories of tetranucleotides

    srnas/4nt-trajectories’s past year of commit activity
    Shell 0 1 0 0 Updated Jul 11, 2016
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