Extensive refactoring of Score and Feature constructor API #74
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The original
Feature
constructor was optimized for instantiating objects from GFF3 data. Static factory constructor methods were duct taped on later, but after using these for a while it's clear things are backwards. This update changes the API so that the default constructor requires a sequence identifier, feature type, and genomic coordinates. The static methodcreate
has been dropped and the static methodfrom_gff3
has been added. Various other getter/setter methods were updated, and the API of theScore
class was also updated.