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1. Calculate-Haplotype-Frequencies Calculate-Haplotype-Frequencies Public

   This script calculates allelic and genotypic frequencies, as well as perform Fisher's Exact Test to compare representation of genotypes and alleles in different sample groups

   R 2

2. Extract-haplotype-sequences Extract-haplotype-sequences Public

   Java

3. jekesa jekesa Public

   Jekesa (Illuminate) is an automated bash pipeline for bacterial whole genome assembly and typing using Illumina paired-end sequencing data.

   Python 6 3

4. lncRNA-analysis lncRNA-analysis Public

   Shell

5. miRNA-analysis miRNA-analysis Public

   Pipeline for miRNA profiling, including read mapping, multi-mapped read correction and read counting

   Shell 1

6. h3abionet/h3ameta h3abionet/h3ameta Public

   H3ABioNet Metagenomics Workflow

   HTML 4 5