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FZ tag of type B not supported #2

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nh13 opened this issue Oct 17, 2012 · 1 comment
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FZ tag of type B not supported #2

nh13 opened this issue Oct 17, 2012 · 1 comment
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@nh13
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nh13 commented Oct 17, 2012

The SAM spec details the type "B" array tag, which is not supported here. The error is:
parsing BAM - Unknown custom field of type FZ:B
terminate called after throwing an instance of 'std::runtime_error'
what(): FAIL_PARSE: Unknown tag type.
Aborted

@ghost ghost assigned mktrost Oct 19, 2012
@mktrost
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mktrost commented Oct 22, 2012

This should now be fixed by updating to the current development version of libStatGen.
If you did a "git clone" from github on libStatGen, just cd into that directory and do a "git pull" and rebuild both libStatGen and bamUtil using "make".

Let me know if this fixes your problem or if you have any questions.

@mktrost mktrost closed this as completed Aug 22, 2013
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