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  1. TigSPLIT TigSPLIT Public

    A tool for splitting up .fasta files, creates a new file for each contig.

    Python 1

  2. porecycler porecycler Public

    Hands free MinION data processing using Porechop for barcode trimming/binning, and Unicycler for assembly.

    Python 2

  3. enaget enaget Public

    enaGet is a simple script for downloading ENA read data by accession number.

    Python 1 1

  4. TigTRIM TigTRIM Public

    A tool to trim contig ID's to 20 character or less, based on input filenames.

    Python

  5. gbkSPLIT gbkSPLIT Public

    Extracts genes using a list of locus tags from .gbk to logically named nucleotide .fasta's.

    Python 2

  6. autoprokka autoprokka Public

    A script that automatically invokes prokka on a directory of FASTA genomes and neatly organises the output.

    Python 7 1