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Implementation for "Comparing Morse Complexes Using Optimal Transport: An Experimental Study"

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MCOpt

Requirements

Beyond the dependencies listed in setup.cfg, this project also requires topologytoolkit be installed inorder to generate morse complexes.

Usage

  1. Setup a virtual environment
python3 -m venv .venv --system-site-packages
source .venv/bin/activate
  1. Install the package
pip install -e .

Experiments

It is recommend that you use the include devcontainer to run the experiments. In order to run all experiments, run the following

cd experiments; python pipeline.py

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Implementation for "Comparing Morse Complexes Using Optimal Transport: An Experimental Study"

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  • Jupyter Notebook 96.1%
  • Python 3.9%