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sunPi/README.md
  • 👋 Hi everyone, I’m Jan Rogel (@sunPi).
  • 👀 I’m interested in Bioinformatics and anything related (Molecular Biology, Biotechnology, etc.)
  • 🌱 I’m currently specializing in cancer -omic analyses with an emphasis on mesothelial cancer
  • 💞️ I’m looking to collaborate on Java/Python/R projects involving machine learning (deep learning), protein modeling or gene expression prediction.
  • 📫 You can reach me on my email: jan.rogel@gmail.com

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  1. dqGSEA dqGSEA Public

    Runs Gene Set Enrichment Analysis with a ranked gene list, that is generated based on the options selected. Curerntly only DESeq2 is supported.

    R

  2. ssGSVA ssGSVA Public

    This is just a simple wrapper for the single sample method of the GSVA package. It offers a docopt header, so it can be run via the console. The packages should be automatically installed, if neces…

    R