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  1. gradlab/GC_NYC gradlab/GC_NYC Public

    Scripts and data for Mortimer et al. 2020 "The distribution and spread of susceptible and resistant Neisseria gonorrhoeae across demographic groups in a major metropolitan center"

    R

  2. gradlab/pcn_tet_susceptibility_gwas gradlab/pcn_tet_susceptibility_gwas Public

    Data and code for "Genome wide association studies define minimal set of loci for prediction of penicillin and tetracycline susceptibility in Neisseria gonorrhoeae"

    R 3

  3. gradlab/mtrC-GWAS gradlab/mtrC-GWAS Public

    Code to reproduce analyses in Ma and Mortimer et al., 2020 ("Adaptation to the cervical environment is associated with increased antibiotic susceptibility in Neisseria gonorrhoeae").

    Gnuplot 4 1

  4. gradlab/lsarp_gwas gradlab/lsarp_gwas Public

    Python 1 2

  5. mtbDrugResistance mtbDrugResistance Public

    The population genetics of drug resistance in Mycobacterium tuberculosis

    HTML 1 2

  6. popgen-stats popgen-stats Public

    Scripts to calculate population genetics statistics

    Python 53 19