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dot.R
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#' Convert `Graphviz` dot content to a SVG
#'
#' Convert a `graphviz` dot digraph as string to `SVG` as string
#'
#' @param dot a `graphviz` dot string
#'
#' @return the SVG as a string
#' @export
#'
#' @examples
#' dot2svg("digraph { A->B }")
dot2svg <- function(dot) {
if(!requireNamespace("V8", quietly = TRUE)) stop("V8 package is required", call. = FALSE)
if (!(utils::packageVersion("V8") >= "1.0")) {
stop('your "V8" package is too old. The DOT package requires V8
package version 1.0 or newer', call. = FALSE)
}
# remove the "\n" from DOT source
scriptDOT <- gsub("[\r\n]", " ", dot)
scriptDOT <- gsub("'", "\"", scriptDOT)
dot <- paste("'", scriptDOT, "'", sep="")
JS <- system.file("lib/viz.js", package = "dtrackr")
# this is an old vis.js
# newer versions are here https://github.com/aduh95/viz.js but use npm and assume node.
ENV <- V8::v8();
ENV$source(JS)
call <- paste("image = Viz(", dot, ")", sep = "")
content <- ENV$eval(call)
return(content)
# viewer <- getOption("viewer")
# if (!is.null(viewer) & display) {
# viewer(dotFile)
# }
}
#' Standard paper sizes
#'
#' A list of standard paper sizes for outputting flowcharts or other dot
#' graphs. These include width and height dimensions in inches and can be
#' used as one way to specify the output size of a dot graph, including
#' flowcharts (see the `size` parameter of [dtrackr::flowchart()]).
#'
#' The sizes available are `A4`, `A5`, `full` (fits a portrait A4 with margins), `half` (half an
#' A4 with margins), `third`, `two_third`, `quarter`, `sixth` (all with reference to
#' an A4 page with margins). There are 2 landscape sizes `A4_landscape` and `full_landscape` which
#' fit an A4 page with or without margins. There are also 2 slide dimensions,
#' to fit with standard presentation software dimensions.
#'
#' This is just a convenience. Similar effects can be achieved by providing `width` and `height`
#' parameters to [dtrackr::flowchart()] directly.
#'
#' @export
std_size = list(
A4 = list(width=8.25,height=11.75,rot=0),
A5 = list(width=5+7/8,height=8.25,rot=0),
full = list(width=5.9,height=8,rot=0),
half = list(width=5.9,height=4,rot=0),
third = list(width=5.9,height=3,rot=0),
two_third = list(width=5.9,height=6,rot=0),
quarter = list(width=5.9,height=2,rot=0),
sixth = list(width=3,height=3,rot=0),
A4_landscape = list(width=8.25, height=11.75,rot=270),
full_landscape = list(width=5.9,height=8,rot=270),
slide_16_9 = list(width=9.32,height=4.5,rot=0),
slide_4_3 = list(width=9.32,height=6,rot=0)
)
#' Save DOT content to a file
#'
#' Convert a digraph in dot format to SVG and save it to a range of output file types
#'
#' @param dot a `graphviz` dot string
#' @param filename the full path of the file name (minus extension for multiple
#' formats)
#' @param size a named list with 3 elements, length and width in inches and
#' rotation. A predefined set of standard sizes are available in the
#' [dtrackr::std_size] object.
#' @param maxWidth a width (on the paper) in inches if `size` is not defined
#' @param maxHeight a height (on the paper) in inches if `size` is not defined
#' @param formats some of `pdf`,`dot`,`svg`,`png`,`ps`
#' @param landscape rotate the output by 270 degrees into a landscape format.
#' `maxWidth` and `maxHeight` still apply and refer to the paper width to fit
#' the flowchart into after rotation. (you might need to flip width and height)
#' @param ... ignored
#'
#' @return a list with items `paths` with the absolute paths of the saved files
#' as a named list, and `svg` as the SVG string of the rendered dot file.
#' @export
#'
#' @examples
#' save_dot("digraph {A->B}",tempfile())
save_dot = function(dot, filename, size = std_size$half, maxWidth = size$width, maxHeight = size$height, formats=c("dot","png","pdf","svg"), landscape = size$rot!=0, ...) {
tmp = filename %>% fs::path_ext()
if(tmp %in% c("dot","png","pdf","svg","ps")) formats=tmp
filename = filename %>% fs::path_ext_remove()
fname = function(extn, suffix = NULL) normalizePath(paste0(c(filename,suffix),collapse="_") %>% fs::path_ext_set(extn),mustWork = FALSE)
if ("dot" %in% formats) {
# message("saving dot to: ",fname("dot"))
suppressMessages(unlink(fname("dot")))
dot %>% writeChar(fname("dot"))
}
svg = dot %>% dot2svg()
svg = svg %>% .scale_svg(maxWidth, maxHeight, landscape)
if ("pdf" %in% formats) {
svg %>% charToRaw() %>% rsvg::rsvg_pdf(
file = fname("pdf")
)
try(
grDevices::embedFonts(fname("pdf")),
silent=TRUE
);
}
if ("png" %in% formats) {
# this is written to pdf first then converted to png and I think this
# was also done because of a difference in PDF and PNG scaling in rsvg
# versions prior to 2.4.0, In 2.4.0 this was changed for PNG but to make it
# easy we are sticking with this and scaling the SVG printing to PDF
# and rescaling the PDF to PNG at 300 dpi.
if (!fs::file_exists(fname("pdf"))) {
tmp = tempfile()
svg %>% charToRaw() %>% rsvg::rsvg_pdf(file = tmp)
} else {
tmp = fname("pdf")
}
pdftools::pdf_render_page(tmp,page = 1,dpi=300) %>%
png::writePNG(fname("png"))
}
if ("svg" %in% formats) {
# With this approach we don't need to "render" the SVG
# but that then requires the correct fonts are available on the
# rendering system. RSVG will convert fonts to glphs and remove this dependency
# but at the cost of preventing further editing.
svg %>% writeChar(fname("svg"))
# svg %>% charToRaw() %>% rsvg::rsvg_svg(
# file = fname("svg")
# )
}
if ("ps" %in% formats) {
svg %>% charToRaw() %>% rsvg::rsvg_ps(
file = fname("ps")
)
}
paths = as.list(sapply(formats,fname))
return(
list(
paths = paths,
svg = svg
))
}
.scale_svg = function(svg, maxWidth = NULL, maxHeight=NULL, landscape=FALSE, dpi = 72) {
defaultWidth = (svg %>% stringr::str_match("width=\"([0-9]*)pt\""))[1,2] %>% as.numeric()
defaultHeight = (svg %>% stringr::str_match("height=\"([0-9]*)pt\""))[1,2] %>% as.numeric()
if (is.null(maxWidth)) maxWidth = (if (landscape) defaultHeight else defaultWidth)/72
if (is.null(maxHeight)) maxHeight = (if (landscape) defaultWidth else defaultHeight)/72
# Calculate a minimum scale based on xscale and yscale then apply that to
# both X and Y. Then rotating things using svg. the origin of rotation requries
# a translation (which is on the original scale of the image)
# The small transform offsets are needed to align the content to the viewport
dpi = 72
if (landscape) {
scale = min(1, maxHeight*72/defaultWidth, maxWidth*72/defaultHeight) * dpi/72
targetWidth = defaultWidth*scale
targetHeight = defaultHeight*scale
transform=sprintf("scale(%1.3f %1.3f) rotate(270) translate(-%1.3f %1.3f)", scale,scale, defaultWidth-4, defaultHeight-4)
viewBox=sprintf("0 0 %1.3f %1.3f", targetHeight, targetWidth)
width=sprintf("%1.3fpt", targetHeight)
height=sprintf("%1.3fpt", targetWidth)
} else {
scale = min(1, maxWidth*72/defaultWidth, maxHeight*72/defaultHeight) * dpi/72
targetWidth = defaultWidth*scale
targetHeight = defaultHeight*scale
transform=sprintf("scale(%1.3f %1.3f) rotate(0) translate(4 %1.3f)", scale, scale, defaultHeight-4)
viewBox=sprintf("0 0 %1.3f %1.3f", targetWidth, targetHeight)
width=sprintf("%1.3fpt", targetWidth)
height=sprintf("%1.3fpt", targetHeight)
}
# perform all scaling within the SVG
svg = svg %>%
stringr::str_replace_all("width=\"([0-9]*)pt\"", sprintf("width=\"%s\"", width)) %>%
stringr::str_replace_all("height=\"([0-9]*)pt\"", sprintf("height=\"%s\"", height)) %>%
stringr::str_replace_all("viewBox=\"[^\"]+\"", sprintf("viewBox=\"%s\"", viewBox)) %>%
stringr::str_replace_all("transform=\"[^\"]+\"", sprintf("transform=\"%s\"", transform))
return(svg)
}