multispec_indices

Script to generate spectral indices in Cloud optimised Geotiff format (COG) from multispectral orthomosaic TIFF. This script has been tested with multispectral data from MicaSense RedEdge-MX and RedEdge-MX Dual sensors (please see the Drone Data Collection and Processing Protocols for more information).

Indices available:

• Implement any new index through multispec_idx_wrapper
  1. In dict_spec_idx_args: add index and wavelengths
  2. In multispec_idx_wrapper: add index in dict_spec_idx_formula and create function f_ to calculate index
• Relevant indices from Spyndex package.

Script arguments:

• -i : input multispectral tiff
• -o : path to save outputs
• -idx: list of indices (generates default_idx_list if none specified)

translate_tiff_cog

This was put together for a very specific use case: to convert orthomosaic TIFF generated in the Calperum campaign (May 2022) ~30 files to COG format for upload to the TERN portal.

Funding: This project was funded by TERN Landscapes
Authors: Poornima Sivanandam, Emiliano Cimoli, Arko Lucieer, School of Geography, Planning and Spatial Sciences, University of Tasmania
Acknowledgements: TERN Landscapes, TERN Surveillance, TERN Data Services