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  1. castanet castanet Public

    Data processing scripts for analysis of targeted metagenomics sequencing data. Intended for use with multiplexed Illumina short-read data generated after enrichment.

    Python 2 1

  2. typewriter typewriter Public

    Aggregate blast results and/or perform MLST for a set of sample sequences vs a given panel of queries.

    Python 2

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    ARTIC nanopore protocol for nCoV2019 novel coronavirus