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I have a question regarding the use of your tools, and it would be more convenient to discuss it here. I am currently analyzing a single cell dataset obtained from a mouse neuronal region, with three different treatment conditions and several replicates per condition. I already used scvi which has been helpful in my experience. However, we faced difficulties in identifying neuronal subtypes. Despite the availability of a rich reference for this region (see here), I am considering utilizing your tools to integrate our data with the existing dataset to facilitate cell typing. Could you please advise me on which model to select? Thank you in advance for your assistance.
The text was updated successfully, but these errors were encountered:
I have a question regarding the use of your tools, and it would be more convenient to discuss it here. I am currently analyzing a single cell dataset obtained from a mouse neuronal region, with three different treatment conditions and several replicates per condition. I already used
scvi
which has been helpful in my experience. However, we faced difficulties in identifying neuronal subtypes. Despite the availability of a rich reference for this region (see here), I am considering utilizing your tools to integrate our data with the existing dataset to facilitate cell typing. Could you please advise me on which model to select? Thank you in advance for your assistance.The text was updated successfully, but these errors were encountered: