Move DESeqDataSetFromTximport into tximport for now?

[mdshw5]

Since the DESeqDataSetFromTximport function is only available in the development version of DESeq2, does it make sense to move the function into tximport until the next DESeq2 stable release?

[mikelove]

I'd rather it stay in its native environment. Some users work in the devel branch so testing there makes sense.

If you want to use it without installing R-devel you can grab the code here:

https://github.com/Bioconductor-mirror/DESeq2/blob/master/R/AllClasses.R#L318-L333

[mdshw5]

Great, thanks.

Matt Shirley

On Dec 11, 2015, at 9:28 AM, Mike Love notifications@github.com wrote:

I'd rather it stay in its native environment. Some users work in the devel branch so testing there makes sense.

If you want to use it without installing R-devel you can grab the code here:

https://github.com/Bioconductor-mirror/DESeq2/blob/master/R/AllClasses.R#L318-L333

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