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the package not loading in R 4.2.0 on Mac #9

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MartinBulla opened this issue May 31, 2022 · 7 comments
Open

the package not loading in R 4.2.0 on Mac #9

MartinBulla opened this issue May 31, 2022 · 7 comments

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@MartinBulla
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Hi Tim,

I have installed the package on Mac Mojave (10.14.6) with R version 4.2.0 (2022-04-22) -- "Vigorous Calisthenics". When loading the package via require(related), I get the following error

loading required package: related
Error: package or namespace load failed for ‘related’:
package ‘related’ was installed before R 4.0.0: please re-install it

Re-installation of the package does not help. Any thoughts on that?

Looking forward to hearing from you,
Martin
@timothyfrasier
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timothyfrasier commented May 31, 2022 via email

@MartinBulla
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Super, Tim. I appreciate it and wish you that the fixing goes smoothly.

@timothyfrasier
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timothyfrasier commented Jun 10, 2022 via email

@MartinBulla
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MartinBulla commented Jun 20, 2022 via email

@kepra3
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kepra3 commented Nov 30, 2022 •
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Hi Tim,

Appreciate the info for installing on Mac. I followed all the steps but I do come to an error.

  • installing source package ‘related’ ...
    ** using staged installation
    ** libs
    Error in if (nzchar(SHLIB_LIBADD)) SHLIB_LIBADD else character() :
    argument is of length zero
  • removing ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library/related’
    Warning in install.packages :
    installation of package ‘/Users/kprata/Dropbox/related_1.0.tar.gz’ had non-zero exit status

Not sure which software this is having an issue with. I do have many different locations for software you mention (e.g., gcc/gfortran) so I wonder if that could be a problem.

Any help on resolving this would be highly appreciated!

Cheers,
Kat

@timothyfrasier
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timothyfrasier commented Nov 30, 2022 via email

@kepra3
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kepra3 commented Nov 30, 2022 •
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Hi Tim,

I already had xcode-select so did not re-install this. I installed XQuartz from the link you provided, installed the appropriate version of gfortran (I have an intel core processor) and adjusted the PATH, I updated my Rstudio, I have R 4.2.0. I re-installed devtools and ggplot2. I downloaded all the .dylib files and placed these in /usr/local/lib/ then downloaded the related.tar.qz and installed from Package Archive File.

versions:

xcode-select version 2373.
GNU Fortran (GCC) 4.8.5
XQuartz 2.8.2 (xorg-server 1.20.14)
RStudio 2022.07.2
devtools_2.4.5
ggplot2_3.4.0

Also, maybe to note within my /usr/local/lib many of the files appear to be hyperlinked to my homebrew 'Cellar', e.g.,

-rw-r--r--@   1 kprata  staff   1.5M 30 Nov 14:42 libgfortran.3.dylib
lrwxr-xr-x    1 kprata  admin    45B 10 Aug  2021 libgif.7.2.0.dylib -> ../Cellar/giflib/5.2.1/lib/libgif.7.2.0.dylib

Except those .dylib files I placed there, which are also not executable.

Cheers,
Kat

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@timothyfrasier @MartinBulla @kepra3