Wilmoth model LT ported

[ikashnitsky]

LogQuad family of model life tables ported from MortalityEstimate::wilmothLT. Fitted models based on the whole current HMD for both sex, females and males are saved as internal data objects

[ikashnitsky]

AppVeyor: Status: 1 WARNING, 1 NOTE

* checking Rd cross-references ... WARNING
Unknown package 'MortalityEstimate' in Rd xrefs

Travis: Found warnings, treating as errors (as requested). I

[timriffe]

How about you clear up these two comments, recommit, and add it to the PR? I won't be doing work on this until tomorrow most likely, but might be able to attend to small things in late afternoon. Thanks!

[timriffe]

I wonder if the warning about fitted_logquad_b not being visible would be overcome by using data(fitted_logquad_b)? Just a guess without googling.

[ikashnitsky]

I'll check

[ikashnitsky]

Funny, there was no warning on my machine, only the visibility note

[timriffe]

good tips here: http://r-pkgs.had.co.nz/data.html

…

On Thu, Dec 5, 2019 at 4:25 PM Ilya Kashnitsky ***@***.***> wrote: Funny, there was no warning on my machine, only the visibility note — You are receiving this because you commented. Reply to this email directly, view it on GitHub <#102?email_source=notifications&email_token=AAG43G5LD5VYDCG4ETX6UM3QXEMQBA5CNFSM4JVMIQWKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEGBCP3A#issuecomment-562178028>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAG43G3GODL5JSVIVFC5NIDQXEMQBANCNFSM4JVMIQWA> .

[timriffe]

I'm merging this in and will try to fix errors/warnings/notes

[ikashnitsky]

The error sits somewhere in the changed identity functions.

Error in lt_id_ma_q(nMx = M0, nax = a0, AgeInt = 1, closeout = FALSE,  : 
  n == length(nax) is not TRUE
Calls: lt_model_lq ... lt_id_morq_a_greville -> lt_rule_4a1_cd -> lt_id_ma_q -> stopifnot

[timriffe]

Hi I’m making lots of changes on my end inside these functions, will pick up again 14:00. Chgs not yet committed tho. Will get to the bottom of it

…

On Fri, Dec 6, 2019 at 10:14 AM Ilya Kashnitsky ***@***.***> wrote: The error sits somewhere in the changed identity functions. Error in lt_id_ma_q(nMx = M0, nax = a0, AgeInt = 1, closeout = FALSE, : n == length(nax) is not TRUE Calls: lt_model_lq ... lt_id_morq_a_greville -> lt_rule_4a1_cd -> lt_id_ma_q -> stopifnot — You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHub <#102?email_source=notifications&email_token=AAG43G4OMC4WENB5WEQS5ITQXIJWRA5CNFSM4JVMIQWKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEGDPZ4Q#issuecomment-562494706>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAG43G6J4ZY7Y6YPZ5523LTQXIJWRANCNFSM4JVMIQWA> .

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