Fast, accurate taxonomic assignments for the human vaginal microbiota
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Updated
May 13, 2024 - HTML
Fast, accurate taxonomic assignments for the human vaginal microbiota
iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline
Repository for manuals for NGS data analysis
Code used for analysis in the publication: Disentangling the link between zebrafish diet, gut microbiome succession, and Mycobacterium chelonae infection. Don't hesitate to reach out with any questions.
Study of farmed oysters and nitrogen cycling in Point Judith Pond, RI. Scripts for analysis of 16S rRNA amplicon and metatranscriptomic data.
MicrobioSee2, a desktop sofware for visulization of microbiome result, which contian multiple modules, such as Alpha Diversity, Beta Diversity, Species Conpositions, volcano plot, and pie chart.
The source code for the MIND pipeline paper
Building a pipeline for automated 16S analysis from paired short-reads or long-reads
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