alphafold
Here are 28 public repositories matching this topic...
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
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Jul 1, 2024 - Python
An implementation of the DeepMind's AlphaFold based on PyTorch for research
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Jan 23, 2021 - Python
An open-source platform for developing protein models beyond AlphaFold.
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Jun 26, 2024 - Python
Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting multiple structures
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Feb 25, 2024 - Python
Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.
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May 5, 2023 - Python
Exploring Evolution-aware & free protein language models as protein function predictors
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Feb 26, 2023 - Python
PyMOL extension to color AlphaFold structures by confidence (pLDDT).
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Feb 18, 2022 - Python
Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.
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Mar 7, 2024 - Python
Singularity recipe for AlphaFold
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Sep 4, 2023 - Python
Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing
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Aug 5, 2021 - Python
A simplified drug discovery pipeline -- generating SMILE molecular with AlphaSMILES, predicting protein structure with AlphaFold, and checking the druggability with fpocket/Amber.
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Aug 13, 2021 - Python
This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
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Jul 25, 2023 - Python
A tool to visualise the results of AlphaFold2 and inspect the quality of structural predictions
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Mar 24, 2022 - Python
Screen interactions with AlphaFold-Multimer
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May 7, 2024 - Python
An implementation of Invariant Point Attention from Alphafold 2
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Jan 7, 2023 - Python
molecular graph representation
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Apr 2, 2024 - Python
This package provides an basic implementation of the contact prediction network used in AlphaFold 1 for beginner, associated model weights and CASP13 dataset as used for CASP13 (2018) and published in Nature
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May 27, 2024 - Python
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