Discover differential transcript usage from polyA-captured single cell RNA-seq data

Interactive R package to quantify, analyse and visualise alternative splicing

The statistical utility for RBP functions (SURF)

Home to the development of the TREND-DB application

Baltica: integrated differential junction usage

Alternative splicing event annotation for Human assembly (hg38)

The package RNAseqAnalysis does the complete analysis of RNA seq data starting from raw reads. It provides the user with differnt functions like generation of qc report, filtering, assembly and GO-term annotation, differential expression analysis and heatmap generation, and Alternative splicing-site prediction

Alternative splicing annotation for AnnotationHub

Analysis of RNA-Seq data for approximately 3500 breast tumors from the SCAN-B project to investigate differential splicing patterns between molecular subtypes and clinical phenotypes

IntroVerse 2.0 Update

Code and scripts for the RNA-seq analysis of project: SMG5-SMG7 authorize nonsense-mediated mRNA decay by enabling SMG6 endonucleolytic activity

Alternative splicing event annotation for Human assembly (hg19)

Code and scripts for the RNA-seq analysis of project: Deciphering the cellular roles and dissecting functional regions of UPF3A and UPF3B in human NMD

Method for retrieving and visualising the protein domains of any protein coding isoform and of different genomes. Enables joint visualisations representing alternative splicing events.

This repository is the current repository for our Jones et al. 2024 manuscript titled Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage.

Quantification and Visualization of Variations of Splicing in Population

This repository is for our 2024 manuscript, Cell-type-specific alternative splicing in the cerebral cortex of a Schinzel-Giedion Syndrome patient variant mouse model