Takes output from DMRichR and performs statistical testing and visualization for CpG and genic annotation enrichments
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Updated
May 1, 2020 - R
Takes output from DMRichR and performs statistical testing and visualization for CpG and genic annotation enrichments
Alternative splicing event annotation for Human assembly (hg19)
Three R scripts for gene-related data conversion and annotation
Contains convenience functions to import Inception's XMI-export into R
neoBattenberg diploma thesis project for fixing and extending original Battenberg R package for subclonal copynumber estimation.
Preprocessing, variants tools for RNA-seq, ChIP-seq analysis
R script which can label relationships in a pedigree
Alternative splicing annotation for AnnotationHub
Pi-S Treatment RNA-seq
Scripts to handle with transcript annotation reports.
Rapid, accurate annotations of Plasmids from Illumina NGS reads
Regularly updated version of `org.At.tair.db`.
Batch annotation and visualization of the peaks identified from ChIP-seq, ChIP-chip, ATAC-seq experiments or any experiments resulted in large number of chromosome ranges
relMUSS is a specification for annotating audio recordings of liturgical services in Christian churches.
Optimising Definitions of Expressed Regions
MORFEE: Mutation on Open Reading FramE annotation
This is the repository of the pipeline META-DIFF, which detects sequences in differential abundances between two conditions, and annotates them taxonomicaly and functionaly.
An R package to help manage the Case Studies in the `throughputdb` repository.
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