Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software package.
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Updated
Sep 27, 2023 - Python
Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software package.
BIDS app wrapping recon-all from FreeSurfer
A BIDS App for minimal preprocessing using the HCP Pipelines
Resting state HRF estimation from BOLD-fMRI signal
BIDS Application for the Configurable Pipeline for the Analysis of Connectomes (C-PAC)
BrainSuite's structural, diffusion, and functional MRI processing pipelines with QC functionalities.
Human infant pipeline, based on abcd-hcp-pipeline, to process fMRI data.
runs MVPA and RSA analysis BIDS bold derivative data
BIDS App for resting state signal extraction using nilearn.
BIDS app using deepMReye to decode eye motion for fMRI time series data.
implements Freesurfer's TRACULA (TRActs Constrained by UnderLying Anatomy) tool for cross-sectional as well as longitudinal (multi session) input data.
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