Sea Urchin Endomesoderm GRN Modeling and Testing of Model Behavior and Robustness under Genetic Perturbations
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Updated
May 9, 2024 - Python
Sea Urchin Endomesoderm GRN Modeling and Testing of Model Behavior and Robustness under Genetic Perturbations
Implementation of a PINN solver for biological differential equations
A repository for the final project in MathBio class, exploring the dynamics of natural pattern adaptation through the lens of a cellular automata model. Contains code, documentation, and resources related to the project.
Bayesian inference of stochastic cellular processes with and without memory in Python.
A Game Theoretic Approach For Rendering Immersive Experiences In The Metaverse
PAR2 Activation and calcium signaling Reaction Model in PySB
Code behind the work "Multiple Synaptic Contacts Combined with Dendritic Filtering Enhance Spatio-Temporal Pattern Recognition of Single Neurons", bioRxiv 2022
Code behind the work "Single Cortical Neurons as Deep Artificial Neural Networks", published in Neuron 2021
A prototype of a probabilistic research model for a math professor. It is meant to simulate a white blood cell chasing a bacteria.
Python toolkit for Bayesian parameter inference, model calibration, and model selection using Nested Sampling
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