Portable Multithreaded Burrows-Wheeler Transform + Run Length Encoding Compressor/Decompressor
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Updated
May 19, 2017 - C
Portable Multithreaded Burrows-Wheeler Transform + Run Length Encoding Compressor/Decompressor
Text compression using Huffman Coding; enhanced using Burrows-Wheeler Transforms and other algorithms.
Python C module for creating suffix, LCP and BWT arrays with UTF-8 text.
Zip and unzip files using Huffman coding with Burrows Wheeler and Move To Front (BW and MTF are only applied to small files)
🌱 seed-search tool used to compare read-variants to the nCov-19 virus genome using Burrows-Wheeler transform, suffix arrays, the FM-Index, and core dynamic programming principles
A simple text compressor.
A compression tool based on the Burrows-Wheeler Transform method.
Burrows-Wheeler transform and LCP array construction in constant space [IWOCA'15, JDA 2017]
External memory BWT and LCP computation for sequence collections with applications [WABI'18, AMB 2019]
ProPhex – an exact k-mer index using Burrows-Wheeler Transform
Computing the Lyndon Array in linear time [JDA 2018, SPIRE'19]
libsais is a library for linear time suffix array, longest common prefix array and burrows wheeler transform construction based on induced sorting algorithm.
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