Research project undertaken in Computational Genomics at the University of Pittsburgh. with Dr. Miler Lee and students to understand Maternal-to-Zygotic transition in Xenopus laevis
-
Updated
Oct 22, 2022 - Shell
Research project undertaken in Computational Genomics at the University of Pittsburgh. with Dr. Miler Lee and students to understand Maternal-to-Zygotic transition in Xenopus laevis
One-stop shop for one-click NGS analyses from the command-line
Bash, shell scripting functions
PD-1 Targeted Antibody Discovery Using AI Protein Diffusion
Large scale, in silico interaction analyses of SARS-CoV-2 nucleocapsid protein variants against human cytokines.
Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.
Set of scripts to run STRUCTURE in parallel on computing grids like MetaCentrum. Scripts are designed for grids and clusters using PBS Pro, but can be easily adopted for another queue system.
Docker images for the running the HADDOCK system for predicting the structure of biomolecular complexes.
A simple batch submission script to submit jobs to AutoDock Vina on Linux and MacOS developed by Bhavesh Ashok.
My notes on programming, mostly using R, Python, and bash.
docker container for running NCI GDC gdc-client
Computational Biology & Bioinformatics Resources
Documentation on St. Jude Cloud.
This is the main repository for the HackBio'2020 Virtual Internship Experience ❤️
Syntax highlighting for computational biology
Add a description, image, and links to the computational-biology topic page so that developers can more easily learn about it.
To associate your repository with the computational-biology topic, visit your repo's landing page and select "manage topics."