accessory scripts for processing varscan somatic/copynumber outputs.
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Updated
Dec 8, 2017 - Python
accessory scripts for processing varscan somatic/copynumber outputs.
Identify one or more connected, focally amplified genomic regions to elucidate the architecture of focal amplifications such as ecDNA.
Wraps the AmpliconSuite-pipeline workflow to identify one or more connected genomic regions which have copy number amplifications.
Snakemake Pipeline for the Analyses of ChIP-seq data in Cancer samples
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