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covid19

The coronavirus disease 2019 (COVID-19) is an infectious disease caused by a type of coronavirus known as SARS-CoV-2 that had caused an ongoing pandemic. This topic is associated with repositories that contain code focused around research and awareness of the virus.

Here are 117 public repositories matching this topic...

ccodwg / Covid19Canada

Epidemiological Data from the COVID-19 Epidemic in Canada

canada dataset mortality covid-19 covid covid19 epidemiological-data timeseries-canada vaccination-data timeseries-prov timeseries-hr cumulative-cases ontario-dataset vaccine-datasets

Updated May 20, 2022
R

emmadoughty / Daily_COVID-19

Visualisation of official UK COVID-19 data

visualisation united-kingdom uk-data deaths phe daily-updates confirmed-cases covid-19 covid-virus covid19 covid-2019 covid-data covid19-data collated-data nhs-regions

Updated Jun 23, 2020
R

covid19-event-risk-planner

appliedbinf / covid19-event-risk-planner

COVID19 risk planner R-Shiny application

bioinformatics shiny modeling rstats shiny-apps daily-data shiny-r covid-19 covid19

Updated Aug 6, 2022
R

mponce0 / covid19.analytics

R package to obtain and analyze live data from the nCOVID19 coronavirus

r covid19 sars-cov-2 covid19-data ncov2019

Updated Aug 18, 2022
R

mattkerlogue / google-covid-mobility-scrape

Script for scraping Google's COVID19 Community Mobility Reports [ARCHIVED]

google r web-scraping rstats rvest google-location-history pdftools github-actions pdf-scraping covid-19 covid covid19 covid-data covid19-data covid-dataset

Updated Oct 26, 2020
R

UKHSA-Internal / coronavirus-dashboard-api-R-sdk

Coronavirus (COVID-19) in the UK - API Service SDK for R

api-service coronavirus covid19 covid19-data govuk-service covid19-uk

Updated Aug 19, 2020
R

nzherald / nz-covid19-data

Repackaging the Ministry of Health's Covid-19 data

new-zealand covid-19 covid19 covid19-data covid19-nz

Updated Dec 18, 2020
R

PlasterPate / covid19Tracker

An R package for tracking coronavirus(COVID-19) cases all over the world

ggplot2 r dplyr coronavirus covid19

Updated Oct 30, 2020
R

amel-github / sars-ani

This is the raw data and code repository of the SARS-ANI project on SARS-CoV-2 events in animals.

tracker animals covid19 sars-cov-2 health-event

Updated Jun 3, 2024
R

alvesrco / pipecov

This project proposes to contribute to fill the knowledge gap about Covid-19SARS-CoV-2 in Brazil and with the global knowledge about the pathogen. The scientific community and governments of other countries are looking for actions along these lines. The United Kingdom recently established a research network for genomic studies of SARS-CoV-2Covid…

genomics bioinformatics-pipeline bioinformatics-analysis bioinformatics-scripts covid19

Updated Apr 27, 2023
R

como-ph / oxcovid19

An R API to the Oxford COVID-19 Database

r covid19 como-consortium oxcovid19

Updated May 7, 2021
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WorldHealthOrganization / godataR

R package for easier interactions with the Go.Data API

api epidemiology covid19 r-analytics godata

Updated May 15, 2023
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CBDRH / ozcoviz

Flexdashboard for covid19 cases

data dashboard australia epidemiology datavisualization rstats-package covid19 covid19-data ozcoviz

Updated Jun 4, 2020
R

covidm-mtd-Omi

rosannaclairebarnard / covidm-mtd-Omi

Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nature Communications (2022).

england modelling vaccination covid19 sars-cov-2 variants-of-concern

Updated Aug 31, 2022
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lin-lab / COVID19-Viz

Visualization of COVID-19 spread metrics.

visualization rshiny rshinyapp covid19 covid19-graph

Updated Apr 15, 2022
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rahulchauhan049 / covidDashboard

covid-19 Data visualization Dashboard

r corona hacktoberfest coronavirus coronavirus-tracking coronavirus-real-time coronavirus-analysis covid-19 covid19 covid-api covid-data covid19-data hacktoberfest-accepted hacktoberfest2021 hacktoberfest2022

Updated Oct 6, 2022
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mkearney / covid19

API Wrapper for COVID Tracking Project

r rstats r-package coronavirus covid-19 covid19 covid19-data

Updated Mar 25, 2021
R

onlyphantom / coronavirus

A Shiny Web App tutorial inspecting the COVID-19 (2019-nCoV) epidemic, data from https://github.com/CSSEGISandData/COVID-19/tree/master/csse_covid_19_data/csse_covid_19_time_series

r shiny shiny-apps shinyapps coronavirus coronavirus-tracking coronavirus-real-time covid-19 covid19

Updated Apr 18, 2020
R

TheEconomist / covid-19-us-seroprevalence-model

The Economist's seroprevalence model estimating American weekly covid-19 infections based on a combination of death by age and sex, IFR by age and sex, and confirmed cases.

Updated Dec 14, 2020
R

como-ph / oxcgrt

An Interface to the Oxford COVID-19 Government Response Tracker API

r covid19 oxcgrt

Updated Mar 27, 2022
R

Created by github

Released December 31, 2019

Followers: 15.9k followers
Repository: topics/covid-19
Website: www.who.int/emergencies/diseases/novel-coronavirus-2019
Wikipedia: Wikipedia